課程資訊
課程名稱
海洋生態實驗方法
Field Experimental Approaches 
開課學期
104-2 
授課對象
理學院  海洋生物及漁業組  
授課教師
魏志潾 
課號
Ocean7169 
課程識別碼
241 M3780 
班次
 
學分
全/半年
半年 
必/選修
選修 
上課時間
 
上課地點
 
備註
校外實習。初選不開放。修課學生由授課教師依學生研究計畫選擇 上課地點:洽授課教師
總人數上限:3人 
Ceiba 課程網頁
http://ceiba.ntu.edu.tw/1042Ocean7169_ 
課程簡介影片
 
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課程概述

Field Experimental Approach (FEA) is sponsored by National Sun Yat-sen University’s (NSYSU) Dongsha Atoll Research Station (DARS), Dongsha Atoll National Park and Institute of Oceanography, National Taiwan University (IONTU). The students will have opportunity to spend one week at DARS (1/21-1/28/2016) to conduct field researches and to learn hand-on experimental methods. Due to weather condition and the rough sea in winter, this FEA course will focus on intertidal sedimentary and seagrass ecosystem in the small lagoon and the southern shore of the Dongsha Island, where the DARS is conveniently located.

Dongsha Atoll National Park is a remoted and the only atoll reef ecosystem in the South China Sea. It is over 250 km from Shantou, China and over 400 km from Kaohsiung, Taiwan. Since its inauguration, the Dongsha Atoll National Park has recieved wide scientific interests both domestically and internationally because of its unique physical setting, such as:

1. The South China sea is the most acid ocean on earth, the pH value is 0.1 lower than the average pH of the seawater (the pH value decreased 0.1 over the past 200 years), it is believed but still unproven that the Dongsha Atoll might be a refuge for marine organisms under ever increasing pressure from ocean acidification and climate changes
2. The largest internal waves (IWs) on earth (up to 150 m in wave height) have been observed in this area. Every 12 hours, the enormous IWs bring nutrient-rich water from the deep sea and propagates through the Dongsha Atoll to shape its unique ecosystem.
3. Because of its remoteness and remained close from publics, Dongsha Atoll is mostly affected by climate forcing (i.e. frequent typhoons & climate changes) with little influence by anthropogenic impacts. This makes Dongsha Atoll an ideal natural laboratory.
4. Dongsha Atoll represents the northern brink of the Coral Reef Triangle in the Indo-West Pacific Ocean. This region is widely recognized as a diversity hotspot and thus the Dongsha Atoll also harbors i 

課程目標
By the end of this course, students are expected to be able to:
1) Conceive, design and implement a field study in Dongsha’s small lagoon
2) Describe and discuss the co-varying effects of physical environments on community structure & functioning of marine organisms
3) Read and understand a scientific literature related to the field experiment, evaluate its findings and discuss its implications
 
課程要求
Grading:
Research proposal 30%
Submit research proposal prior to the DARS trip
Preliminary report 30%
Submit progress and preliminary results to DARS before leaving the island
Final report 40%
Submit final report within 3 month (4/29) of returning to Taiwan
The report should include title, abstract, introduction, methods, results and discussion.
Other requirement:
Presentation of research proposal (with SYSU students) at DARS may be required.
Group presentation introducing DARS and Dongsha experience at IONTU’s Friday seminar series
 
預期每週課後學習時數
 
Office Hours
 
指定閱讀
待補 
參考書目
Bonaglia S, Nascimento FJA, Bartoli M, Klawonn I, Bruchert V (2014) Meiofauna increases bacterial denitrification in marine sediments. Nat Commun 5:5133
Bostrom C, Jackson EL, Simenstad CA (2006) Seagrass landscapes and their effects on associated fauna: A review. Estuarine, Coastal and Shelf Science 68:383–403
Castorani MCN, Hovel KA, Williams SL, Baskett ML (2014) Disturbance facilitates the coexistence of antagonistic ecosystem engineers in California estuaries. Ecology 95:2277–2288
Glud RN (2008) Oxygen dynamics of marine sediments. Marine Biology Research 4:243–289
Lohrer AM, Cummings VJ, Thrush SF (2012) Altered Sea Ice Thickness and Permanence Affects Benthic Ecosystem Functioning in Coastal Antarctica. Ecosystems 16:224–236
Lohrer AM, Thrush SF, Gibbs MM (2004) Bioturbators enhance ecosystem function through complex biogeochemical interactions. Nature 431:1092–1095
Lohrer AM, Thrush SF, Hewitt JE, Kraan C (2015) The up-scaling of ecosystem functions in a heterogeneous world. Scientific Reports 5:10349
Michaels RE, Zieman JC (2013) Fiddler crab (Uca spp.) burrows have little effect on surrounding sediment oxygen concentrations. Journal of Experimental Marine Biology and Ecology 448:104–113
Pillay D, Branch GM (2011) Bioengineering effects of burrowing thalassinidean shrimps on marine soft-bottom ecosystems. In: Oceanography and Marine Biology. CRC Press
Satoh H, Okabe S (2013) Spatial and Temporal Oxygen Dynamics in Macrofaunal Burrows in Sediments: A Review of Analytical Tools and Observational Evidence. Microbes and Environments 28:166–179
Takeuchi S, Tamaki A (2014) Assessment of benthic disturbance associated with stingray foraging for ghost shrimp by aerial survey over an intertidal sandflat. Continental Shelf Research 84:139–157
Thrush SF, Hewitt JE, Parkes S, Lohrer AM, Pilditch C, Woodin SA, Wethey DS, Chiantore M, Asnaghi V, De Juan S, Kraan C, Rodil I, Savage C, Van Colen C (2014) Experimenting with ecosystem interaction networks in search of threshold potentials in real-world marine ecosystems. Ecology 95:1451–1457
 
評量方式
(僅供參考)
   
課程進度
週次
日期
單元主題
第1週
1/4  Preparation of research proposal 
第2週
1/11  Preparation of research proposal 
第3週
1/21-28  Field trip at DARS
Photo: https://goo.gl/photos/SiQaoLpfofGWy484A 
第4週
3/7  Sample processing, data analysis and report writing 
第5週
4/11  Sample processing, data analysis and report writing 
第6週
4/29  Final report deadline